Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
P04224 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.27□□□□□ -0.28
P04224 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
P04224 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
P04224 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
P04224 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
P04224 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
P04224 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.27□□□□□ -0.29
P04224 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
P04224 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
P04224 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
P04224 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.27□□□□□ -0.29
P04224 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04224 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.27□□□□□ -0.29
P04224 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04224 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04224 Gm7889-201ENSMUST00000185591 958 ntBASIC13.27□□□□□ -0.29
P04224 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04224 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04224 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.27□□□□□ -0.29
P04224 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04224 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04224 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.27□□□□□ -0.29
P04224 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
P04224 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04224 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04224 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04224 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
P04224 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04224 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04224 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04224 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04224 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.27□□□□□ -0.29
P04224 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
P04224 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04224 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04224 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
P04224 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.26□□□□□ -0.29
P04224 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
P04224 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
P04224 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.26□□□□□ -0.29
P04224 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Gm27389-201ENSMUST00000183622 195 ntBASIC13.26□□□□□ -0.29
P04224 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.26□□□□□ -0.29
P04224 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Gm45058-201ENSMUST00000205810 766 ntBASIC13.26□□□□□ -0.29
P04224 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.26□□□□□ -0.29
P04224 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.26□□□□□ -0.29
P04224 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.26□□□□□ -0.29
P04224 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
P04224 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.26□□□□□ -0.29
P04224 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04224 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04224 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.25□□□□□ -0.29
P04224 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04224 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04224 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
P04224 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04224 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04224 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04224 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
P04224 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
P04224 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04224 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04224 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.25□□□□□ -0.29
P04224 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04224 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.25□□□□□ -0.29
P04224 Gm10052-201ENSMUST00000168019 960 ntBASIC13.25□□□□□ -0.29
P04224 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
P04224 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms