Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a1P02463 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a1P02463 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a1P02463 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Col4a1P02463 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a1P02463 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a1P02463 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a1P02463 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a1P02463 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Col4a1P02463 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a1P02463 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a1P02463 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
Col4a1P02463 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC18.31■□□□□ 0.52
Col4a1P02463 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a1P02463 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a1P02463 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.31■□□□□ 0.52
Col4a1P02463 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a1P02463 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a1P02463 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a1P02463 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a1P02463 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a1P02463 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC18.31■□□□□ 0.52
Col4a1P02463 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a1P02463 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC18.31■□□□□ 0.52
Col4a1P02463 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a1P02463 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col4a1P02463 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC18.3■□□□□ 0.52
Col4a1P02463 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a1P02463 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a1P02463 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a1P02463 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a1P02463 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.3■□□□□ 0.52
Col4a1P02463 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a1P02463 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a1P02463 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a1P02463 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a1P02463 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a1P02463 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC18.3■□□□□ 0.52
Col4a1P02463 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.3■□□□□ 0.52
Col4a1P02463 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC18.3■□□□□ 0.52
Col4a1P02463 Gm45195-201ENSMUST00000205597 1008 ntBASIC18.3■□□□□ 0.52
Col4a1P02463 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a1P02463 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Col4a1P02463 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a1P02463 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a1P02463 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col4a1P02463 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Col4a1P02463 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a1P02463 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a1P02463 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a1P02463 Gm21009-201ENSMUST00000197169 1669 ntBASIC18.29■□□□□ 0.52
Col4a1P02463 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a1P02463 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a1P02463 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.29■□□□□ 0.52
Col4a1P02463 Gm8749-201ENSMUST00000117737 331 ntBASIC18.29■□□□□ 0.52
Col4a1P02463 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a1P02463 Gm21854-201ENSMUST00000179901 471 ntBASIC18.29■□□□□ 0.52
Col4a1P02463 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC18.29■□□□□ 0.52
Col4a1P02463 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Col4a1P02463 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a1P02463 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Col4a1P02463 Gm6180-201ENSMUST00000065243 498 ntBASIC18.29■□□□□ 0.52
Col4a1P02463 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a1P02463 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a1P02463 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Col4a1P02463 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a1P02463 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a1P02463 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a1P02463 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Col4a1P02463 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC18.29■□□□□ 0.52
Col4a1P02463 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a1P02463 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a1P02463 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a1P02463 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col4a1P02463 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Col4a1P02463 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col4a1P02463 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC18.28■□□□□ 0.52
Col4a1P02463 Gm3436-201ENSMUST00000179930 840 ntBASIC18.28■□□□□ 0.52
Col4a1P02463 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col4a1P02463 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col4a1P02463 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Col4a1P02463 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col4a1P02463 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col4a1P02463 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col4a1P02463 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Col4a1P02463 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC18.28■□□□□ 0.52
Col4a1P02463 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.28■□□□□ 0.52
Col4a1P02463 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col4a1P02463 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col4a1P02463 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col4a1P02463 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col4a1P02463 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col4a1P02463 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a1P02463 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a1P02463 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a1P02463 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a1P02463 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a1P02463 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.27■□□□□ 0.52
Col4a1P02463 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a1P02463 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms