Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.95□□□□□ -0.5
P01788 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P01788 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01788 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01788 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01788 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.94□□□□□ -0.5
P01788 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Carlr-201ENSMUST00000181515 2574 ntBASIC11.94□□□□□ -0.5
P01788 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
P01788 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
P01788 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.94□□□□□ -0.5
P01788 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.94□□□□□ -0.5
P01788 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC11.94□□□□□ -0.5
P01788 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.94□□□□□ -0.5
P01788 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
P01788 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
P01788 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
P01788 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
P01788 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.94□□□□□ -0.5
P01788 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
P01788 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
P01788 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.94□□□□□ -0.5
P01788 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.94□□□□□ -0.5
P01788 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P01788 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.94□□□□□ -0.5
P01788 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.94□□□□□ -0.5
P01788 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
P01788 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
P01788 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
P01788 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.93□□□□□ -0.5
P01788 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
P01788 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC11.93□□□□□ -0.5
P01788 Gm27867-201ENSMUST00000184778 125 ntBASIC11.93□□□□□ -0.5
P01788 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.93□□□□□ -0.5
P01788 Gm7506-201ENSMUST00000207758 815 ntBASIC11.93□□□□□ -0.5
P01788 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
P01788 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.93□□□□□ -0.5
P01788 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01788 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01788 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.92□□□□□ -0.5
P01788 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01788 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01788 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01788 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
P01788 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P01788 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.92□□□□□ -0.5
P01788 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.92□□□□□ -0.5
P01788 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01788 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
P01788 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P01788 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms