Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.03□□□□□ -0.32
Igh-VJ558P01758 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Igh-VJ558P01758 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Igh-VJ558P01758 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Igh-VJ558P01758 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Igh-VJ558P01758 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Igh-VJ558P01758 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Igh-VJ558P01758 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Igh-VJ558P01758 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Igh-VJ558P01758 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Igh-VJ558P01758 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.02□□□□□ -0.32
Igh-VJ558P01758 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Mir5131-201ENSMUST00000175426 93 ntBASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Mir5126-201ENSMUST00000175513 77 ntBASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Gm27628-201ENSMUST00000184911 107 ntBASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.02□□□□□ -0.33
Igh-VJ558P01758 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.02□□□□□ -0.33
Igh-VJ558P01758 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Gm15590-201ENSMUST00000078419 552 ntBASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igh-VJ558P01758 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igh-VJ558P01758 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Carlr-201ENSMUST00000181515 2574 ntBASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Gm27300-201ENSMUST00000184085 97 ntBASIC13.01□□□□□ -0.33
Igh-VJ558P01758 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Gm27335-201ENSMUST00000184758 97 ntBASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.01□□□□□ -0.33
Igh-VJ558P01758 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms