Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Olfr129-201ENSMUST00000122318 993 ntBASIC15.58■□□□□ 0.08
CopeO89079 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CopeO89079 Gm12497-201ENSMUST00000138778 237 ntBASIC15.58■□□□□ 0.08
CopeO89079 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CopeO89079 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CopeO89079 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CopeO89079 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CopeO89079 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CopeO89079 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
CopeO89079 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.58■□□□□ 0.08
CopeO89079 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CopeO89079 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CopeO89079 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CopeO89079 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CopeO89079 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CopeO89079 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.58■□□□□ 0.08
CopeO89079 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CopeO89079 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CopeO89079 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CopeO89079 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CopeO89079 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CopeO89079 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CopeO89079 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CopeO89079 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CopeO89079 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CopeO89079 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CopeO89079 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CopeO89079 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.57■□□□□ 0.08
CopeO89079 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.57■□□□□ 0.08
CopeO89079 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.57■□□□□ 0.08
CopeO89079 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.57■□□□□ 0.08
CopeO89079 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CopeO89079 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CopeO89079 Gm23634-201ENSMUST00000175071 91 ntBASIC15.57■□□□□ 0.08
CopeO89079 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CopeO89079 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CopeO89079 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.57■□□□□ 0.08
CopeO89079 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CopeO89079 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CopeO89079 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CopeO89079 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CopeO89079 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.57■□□□□ 0.08
CopeO89079 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CopeO89079 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.57■□□□□ 0.08
CopeO89079 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.57■□□□□ 0.08
CopeO89079 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.57■□□□□ 0.08
CopeO89079 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
CopeO89079 Celf4-206ENSMUST00000224553 1729 ntBASIC15.57■□□□□ 0.08
CopeO89079 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopeO89079 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CopeO89079 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CopeO89079 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.56■□□□□ 0.08
CopeO89079 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopeO89079 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.56■□□□□ 0.08
CopeO89079 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CopeO89079 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CopeO89079 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CopeO89079 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CopeO89079 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CopeO89079 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CopeO89079 Gm4459-201ENSMUST00000118750 468 ntBASIC15.56■□□□□ 0.08
CopeO89079 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CopeO89079 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopeO89079 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
CopeO89079 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
CopeO89079 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
CopeO89079 Gm27742-201ENSMUST00000184667 60 ntBASIC15.56■□□□□ 0.08
CopeO89079 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CopeO89079 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.56■□□□□ 0.08
CopeO89079 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CopeO89079 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopeO89079 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopeO89079 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopeO89079 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopeO89079 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CopeO89079 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopeO89079 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopeO89079 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.56■□□□□ 0.08
CopeO89079 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopeO89079 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopeO89079 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopeO89079 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CopeO89079 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopeO89079 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopeO89079 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CopeO89079 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
CopeO89079 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.55■□□□□ 0.08
CopeO89079 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CopeO89079 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CopeO89079 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CopeO89079 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CopeO89079 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.55■□□□□ 0.08
CopeO89079 AA414768-201ENSMUST00000121924 1257 ntBASIC15.55■□□□□ 0.08
CopeO89079 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.55■□□□□ 0.08
CopeO89079 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CopeO89079 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.55■□□□□ 0.08
CopeO89079 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.55■□□□□ 0.08
CopeO89079 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CopeO89079 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.55■□□□□ 0.08
CopeO89079 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms