Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd4O89016 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd4O89016 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.68□□□□□ -0.22
Abcd4O89016 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd4O89016 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd4O89016 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd4O89016 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.67□□□□□ -0.22
Abcd4O89016 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Abcd4O89016 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.67□□□□□ -0.22
Abcd4O89016 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.67□□□□□ -0.22
Abcd4O89016 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 Gm23935-201ENSMUST00000102303 57 ntBASIC13.67□□□□□ -0.22
Abcd4O89016 Gm24270-201ENSMUST00000102326 57 ntBASIC13.67□□□□□ -0.22
Abcd4O89016 Gm4995-201ENSMUST00000117247 432 ntBASIC13.67□□□□□ -0.22
Abcd4O89016 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 Gm24245-201ENSMUST00000157318 57 ntBASIC13.67□□□□□ -0.22
Abcd4O89016 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.67□□□□□ -0.22
Abcd4O89016 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.67□□□□□ -0.22
Abcd4O89016 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Abcd4O89016 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Abcd4O89016 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.67□□□□□ -0.22
Abcd4O89016 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.67□□□□□ -0.22
Abcd4O89016 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.67□□□□□ -0.22
Abcd4O89016 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd4O89016 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.66□□□□□ -0.22
Abcd4O89016 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.66□□□□□ -0.22
Abcd4O89016 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.66□□□□□ -0.22
Abcd4O89016 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.66□□□□□ -0.22
Abcd4O89016 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.66□□□□□ -0.22
Abcd4O89016 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.66□□□□□ -0.22
Abcd4O89016 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.66□□□□□ -0.22
Abcd4O89016 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Abcd4O89016 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.66□□□□□ -0.22
Abcd4O89016 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Abcd4O89016 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.66□□□□□ -0.22
Abcd4O89016 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd4O89016 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Abcd4O89016 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abcd4O89016 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abcd4O89016 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Abcd4O89016 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abcd4O89016 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abcd4O89016 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abcd4O89016 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abcd4O89016 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abcd4O89016 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abcd4O89016 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.65□□□□□ -0.22
Abcd4O89016 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Abcd4O89016 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Abcd4O89016 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.65□□□□□ -0.22
Abcd4O89016 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Abcd4O89016 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Abcd4O89016 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.65□□□□□ -0.22
Abcd4O89016 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms