Protein–RNA interactions for Protein: O70480

Vamp4, Vesicle-associated membrane protein 4, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp4O70480 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vamp4O70480 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vamp4O70480 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vamp4O70480 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vamp4O70480 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vamp4O70480 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.97■□□□□ 0.63
Vamp4O70480 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vamp4O70480 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.97■□□□□ 0.63
Vamp4O70480 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Vamp4O70480 Gm27702-201ENSMUST00000184512 56 ntBASIC18.97■□□□□ 0.63
Vamp4O70480 Gm2756-201ENSMUST00000195851 400 ntBASIC18.97■□□□□ 0.63
Vamp4O70480 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
Vamp4O70480 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vamp4O70480 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vamp4O70480 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vamp4O70480 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vamp4O70480 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Vamp4O70480 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vamp4O70480 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vamp4O70480 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Vamp4O70480 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vamp4O70480 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vamp4O70480 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vamp4O70480 Gm23935-201ENSMUST00000102303 57 ntBASIC18.96■□□□□ 0.63
Vamp4O70480 Gm24270-201ENSMUST00000102326 57 ntBASIC18.96■□□□□ 0.63
Vamp4O70480 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18.96■□□□□ 0.63
Vamp4O70480 Gm24245-201ENSMUST00000157318 57 ntBASIC18.96■□□□□ 0.63
Vamp4O70480 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.96■□□□□ 0.63
Vamp4O70480 Gm43575-201ENSMUST00000196420 516 ntBASIC18.96■□□□□ 0.63
Vamp4O70480 Gm2213-201ENSMUST00000197485 688 ntBASIC18.96■□□□□ 0.63
Vamp4O70480 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vamp4O70480 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.96■□□□□ 0.63
Vamp4O70480 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Vamp4O70480 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.96■□□□□ 0.63
Vamp4O70480 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.96■□□□□ 0.63
Vamp4O70480 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Vamp4O70480 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vamp4O70480 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vamp4O70480 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vamp4O70480 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vamp4O70480 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vamp4O70480 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vamp4O70480 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Vamp4O70480 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.96■□□□□ 0.63
Vamp4O70480 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vamp4O70480 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vamp4O70480 Tcf21-202ENSMUST00000218002 1788 ntBASIC18.96■□□□□ 0.63
Vamp4O70480 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.96■□□□□ 0.63
Vamp4O70480 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vamp4O70480 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vamp4O70480 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Vamp4O70480 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vamp4O70480 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vamp4O70480 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Vamp4O70480 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vamp4O70480 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vamp4O70480 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vamp4O70480 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vamp4O70480 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vamp4O70480 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vamp4O70480 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vamp4O70480 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.95■□□□□ 0.62
Vamp4O70480 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.95■□□□□ 0.62
Vamp4O70480 Gm15483-201ENSMUST00000120338 456 ntBASIC18.95■□□□□ 0.62
Vamp4O70480 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.95■□□□□ 0.62
Vamp4O70480 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Vamp4O70480 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.95■□□□□ 0.62
Vamp4O70480 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vamp4O70480 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vamp4O70480 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Vamp4O70480 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vamp4O70480 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Vamp4O70480 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vamp4O70480 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vamp4O70480 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vamp4O70480 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vamp4O70480 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vamp4O70480 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vamp4O70480 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vamp4O70480 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vamp4O70480 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.94■□□□□ 0.62
Vamp4O70480 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Vamp4O70480 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC18.94■□□□□ 0.62
Vamp4O70480 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vamp4O70480 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Vamp4O70480 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vamp4O70480 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vamp4O70480 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Vamp4O70480 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vamp4O70480 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vamp4O70480 Gm13365-201ENSMUST00000121188 973 ntBASIC18.94■□□□□ 0.62
Vamp4O70480 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vamp4O70480 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Vamp4O70480 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vamp4O70480 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vamp4O70480 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Vamp4O70480 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vamp4O70480 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.94■□□□□ 0.62
Vamp4O70480 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Vamp4O70480 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms