Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgceO70258 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SgceO70258 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgceO70258 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SgceO70258 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SgceO70258 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.52□□□□□ -0.25
SgceO70258 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SgceO70258 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.52□□□□□ -0.25
SgceO70258 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgceO70258 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SgceO70258 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SgceO70258 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgceO70258 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgceO70258 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgceO70258 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgceO70258 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgceO70258 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SgceO70258 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SgceO70258 BC037039-201ENSMUST00000192003 2205 ntBASIC13.51□□□□□ -0.25
SgceO70258 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.51□□□□□ -0.25
SgceO70258 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgceO70258 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgceO70258 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgceO70258 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SgceO70258 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SgceO70258 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.51□□□□□ -0.25
SgceO70258 Gm6376-201ENSMUST00000209407 580 ntBASIC13.51□□□□□ -0.25
SgceO70258 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SgceO70258 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SgceO70258 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgceO70258 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SgceO70258 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SgceO70258 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgceO70258 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SgceO70258 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SgceO70258 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SgceO70258 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgceO70258 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgceO70258 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgceO70258 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgceO70258 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgceO70258 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgceO70258 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.51□□□□□ -0.25
SgceO70258 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgceO70258 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SgceO70258 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.5□□□□□ -0.25
SgceO70258 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SgceO70258 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SgceO70258 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.5□□□□□ -0.25
SgceO70258 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.5□□□□□ -0.25
SgceO70258 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 Gm25990-201ENSMUST00000102440 86 ntBASIC13.5□□□□□ -0.25
SgceO70258 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
SgceO70258 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
SgceO70258 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.5□□□□□ -0.25
SgceO70258 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.5□□□□□ -0.25
SgceO70258 Gm6089-201ENSMUST00000197666 938 ntBASIC13.5□□□□□ -0.25
SgceO70258 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.5□□□□□ -0.25
SgceO70258 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SgceO70258 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgceO70258 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SgceO70258 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
SgceO70258 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.49□□□□□ -0.25
SgceO70258 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SgceO70258 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SgceO70258 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SgceO70258 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.49□□□□□ -0.25
SgceO70258 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgceO70258 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.49□□□□□ -0.25
SgceO70258 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SgceO70258 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgceO70258 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SgceO70258 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SgceO70258 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgceO70258 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgceO70258 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgceO70258 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgceO70258 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms