Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh5O55240 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh5O55240 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.28□□□□□ -0.12
Rdh5O55240 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rdh5O55240 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.28□□□□□ -0.12
Rdh5O55240 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.28□□□□□ -0.12
Rdh5O55240 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.28□□□□□ -0.12
Rdh5O55240 Gm45167-201ENSMUST00000208007 322 ntBASIC14.28□□□□□ -0.12
Rdh5O55240 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Celf4-206ENSMUST00000224553 1729 ntBASIC14.28□□□□□ -0.12
Rdh5O55240 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.28□□□□□ -0.12
Rdh5O55240 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rdh5O55240 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh5O55240 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rdh5O55240 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Rdh5O55240 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rdh5O55240 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Rdh5O55240 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rdh5O55240 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rdh5O55240 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rdh5O55240 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rdh5O55240 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Rdh5O55240 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Rdh5O55240 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rdh5O55240 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.27□□□□□ -0.12
Rdh5O55240 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rdh5O55240 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rdh5O55240 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rdh5O55240 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rdh5O55240 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh5O55240 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rdh5O55240 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.27□□□□□ -0.13
Rdh5O55240 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.27□□□□□ -0.13
Rdh5O55240 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh5O55240 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh5O55240 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh5O55240 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh5O55240 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh5O55240 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.27□□□□□ -0.13
Rdh5O55240 Gm27525-201ENSMUST00000184465 107 ntBASIC14.27□□□□□ -0.13
Rdh5O55240 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh5O55240 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh5O55240 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rdh5O55240 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh5O55240 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.27□□□□□ -0.13
Rdh5O55240 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh5O55240 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh5O55240 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh5O55240 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh5O55240 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh5O55240 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh5O55240 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rdh5O55240 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.26□□□□□ -0.13
Rdh5O55240 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rdh5O55240 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rdh5O55240 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.26□□□□□ -0.13
Rdh5O55240 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Rdh5O55240 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.26□□□□□ -0.13
Rdh5O55240 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.26□□□□□ -0.13
Rdh5O55240 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Gm5867-201ENSMUST00000063197 592 ntBASIC14.26□□□□□ -0.13
Rdh5O55240 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms