Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl35aO55142 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl35aO55142 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl35aO55142 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Rpl35aO55142 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl35aO55142 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
Rpl35aO55142 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC11.25□□□□□ -0.61
Rpl35aO55142 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl35aO55142 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl35aO55142 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl35aO55142 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Rpl35aO55142 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Rpl35aO55142 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl35aO55142 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl35aO55142 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Rpl35aO55142 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Rpl35aO55142 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl35aO55142 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC11.25□□□□□ -0.61
Rpl35aO55142 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.25□□□□□ -0.61
Rpl35aO55142 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl35aO55142 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.25□□□□□ -0.61
Rpl35aO55142 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl35aO55142 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl35aO55142 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl35aO55142 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl35aO55142 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl35aO55142 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl35aO55142 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.24□□□□□ -0.61
Rpl35aO55142 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl35aO55142 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl35aO55142 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rpl35aO55142 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.24□□□□□ -0.61
Rpl35aO55142 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl35aO55142 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.24□□□□□ -0.61
Rpl35aO55142 Gm15467-201ENSMUST00000120582 445 ntBASIC11.24□□□□□ -0.61
Rpl35aO55142 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.24□□□□□ -0.61
Rpl35aO55142 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Rpl35aO55142 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl35aO55142 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rpl35aO55142 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.24□□□□□ -0.61
Rpl35aO55142 Gm5264-201ENSMUST00000190584 848 ntBASIC11.24□□□□□ -0.61
Rpl35aO55142 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.24□□□□□ -0.61
Rpl35aO55142 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl35aO55142 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl35aO55142 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.24□□□□□ -0.61
Rpl35aO55142 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl35aO55142 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Rpl35aO55142 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl35aO55142 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.24□□□□□ -0.61
Rpl35aO55142 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl35aO55142 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl35aO55142 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl35aO55142 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl35aO55142 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rpl35aO55142 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl35aO55142 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl35aO55142 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl35aO55142 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl35aO55142 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rpl35aO55142 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpl35aO55142 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Rpl35aO55142 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.23□□□□□ -0.61
Rpl35aO55142 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rpl35aO55142 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Rpl35aO55142 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Rpl35aO55142 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.23□□□□□ -0.61
Rpl35aO55142 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Gm10499-201ENSMUST00000174094 934 ntBASIC11.23□□□□□ -0.61
Rpl35aO55142 Gm8318-201ENSMUST00000182954 872 ntBASIC11.23□□□□□ -0.61
Rpl35aO55142 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.23□□□□□ -0.61
Rpl35aO55142 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.23□□□□□ -0.61
Rpl35aO55142 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.23□□□□□ -0.61
Rpl35aO55142 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.23□□□□□ -0.61
Rpl35aO55142 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.23□□□□□ -0.61
Rpl35aO55142 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.23□□□□□ -0.61
Rpl35aO55142 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rpl35aO55142 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms