Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trdmt1O55055 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trdmt1O55055 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trdmt1O55055 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trdmt1O55055 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trdmt1O55055 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.52■□□□□ 0.24
Trdmt1O55055 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trdmt1O55055 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trdmt1O55055 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trdmt1O55055 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trdmt1O55055 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trdmt1O55055 Gm7488-201ENSMUST00000117148 684 ntBASIC16.52■□□□□ 0.24
Trdmt1O55055 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.52■□□□□ 0.24
Trdmt1O55055 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.52■□□□□ 0.24
Trdmt1O55055 Gm9719-201ENSMUST00000162765 543 ntBASIC16.52■□□□□ 0.24
Trdmt1O55055 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Trdmt1O55055 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.52■□□□□ 0.24
Trdmt1O55055 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trdmt1O55055 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trdmt1O55055 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trdmt1O55055 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trdmt1O55055 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trdmt1O55055 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Trdmt1O55055 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trdmt1O55055 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Trdmt1O55055 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trdmt1O55055 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trdmt1O55055 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trdmt1O55055 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trdmt1O55055 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Trdmt1O55055 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trdmt1O55055 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trdmt1O55055 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trdmt1O55055 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trdmt1O55055 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trdmt1O55055 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trdmt1O55055 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trdmt1O55055 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.51■□□□□ 0.23
Trdmt1O55055 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trdmt1O55055 Dancr-204ENSMUST00000132389 2347 ntBASIC16.51■□□□□ 0.23
Trdmt1O55055 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trdmt1O55055 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trdmt1O55055 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trdmt1O55055 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trdmt1O55055 Gm24543-201ENSMUST00000103867 82 ntBASIC16.51■□□□□ 0.23
Trdmt1O55055 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trdmt1O55055 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.51■□□□□ 0.23
Trdmt1O55055 Gm16215-201ENSMUST00000161990 637 ntBASIC16.51■□□□□ 0.23
Trdmt1O55055 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.51■□□□□ 0.23
Trdmt1O55055 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trdmt1O55055 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trdmt1O55055 Gm27838-201ENSMUST00000184829 128 ntBASIC16.51■□□□□ 0.23
Trdmt1O55055 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trdmt1O55055 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.51■□□□□ 0.23
Trdmt1O55055 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trdmt1O55055 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trdmt1O55055 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trdmt1O55055 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trdmt1O55055 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trdmt1O55055 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trdmt1O55055 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trdmt1O55055 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.51■□□□□ 0.23
Trdmt1O55055 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trdmt1O55055 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trdmt1O55055 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trdmt1O55055 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdmt1O55055 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdmt1O55055 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.5■□□□□ 0.23
Trdmt1O55055 Syt7-204ENSMUST00000223586 1344 ntBASIC16.5■□□□□ 0.23
Trdmt1O55055 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trdmt1O55055 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdmt1O55055 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdmt1O55055 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdmt1O55055 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Trdmt1O55055 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdmt1O55055 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdmt1O55055 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdmt1O55055 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdmt1O55055 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trdmt1O55055 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.5■□□□□ 0.23
Trdmt1O55055 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.5■□□□□ 0.23
Trdmt1O55055 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.5■□□□□ 0.23
Trdmt1O55055 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdmt1O55055 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trdmt1O55055 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trdmt1O55055 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdmt1O55055 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdmt1O55055 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdmt1O55055 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdmt1O55055 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trdmt1O55055 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdmt1O55055 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.5■□□□□ 0.23
Trdmt1O55055 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdmt1O55055 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trdmt1O55055 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trdmt1O55055 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trdmt1O55055 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trdmt1O55055 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trdmt1O55055 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trdmt1O55055 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms