Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SncaO55042 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.5□□□□□ -0.41
SncaO55042 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SncaO55042 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SncaO55042 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SncaO55042 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.5□□□□□ -0.41
SncaO55042 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SncaO55042 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SncaO55042 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SncaO55042 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SncaO55042 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SncaO55042 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SncaO55042 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SncaO55042 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SncaO55042 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SncaO55042 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SncaO55042 Gm8344-201ENSMUST00000119813 856 ntBASIC12.5□□□□□ -0.41
SncaO55042 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.5□□□□□ -0.41
SncaO55042 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.5□□□□□ -0.41
SncaO55042 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.5□□□□□ -0.41
SncaO55042 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
SncaO55042 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.5□□□□□ -0.41
SncaO55042 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.5□□□□□ -0.41
SncaO55042 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.5□□□□□ -0.41
SncaO55042 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SncaO55042 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SncaO55042 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SncaO55042 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SncaO55042 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SncaO55042 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SncaO55042 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SncaO55042 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SncaO55042 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.5□□□□□ -0.41
SncaO55042 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.5□□□□□ -0.41
SncaO55042 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SncaO55042 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SncaO55042 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.5□□□□□ -0.41
SncaO55042 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SncaO55042 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SncaO55042 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SncaO55042 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SncaO55042 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SncaO55042 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SncaO55042 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SncaO55042 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SncaO55042 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
SncaO55042 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SncaO55042 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SncaO55042 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SncaO55042 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SncaO55042 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SncaO55042 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SncaO55042 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SncaO55042 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.49□□□□□ -0.41
SncaO55042 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.49□□□□□ -0.41
SncaO55042 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SncaO55042 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SncaO55042 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
SncaO55042 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SncaO55042 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SncaO55042 Olfr129-201ENSMUST00000122318 993 ntBASIC12.49□□□□□ -0.41
SncaO55042 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.49□□□□□ -0.41
SncaO55042 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SncaO55042 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.49□□□□□ -0.41
SncaO55042 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SncaO55042 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SncaO55042 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SncaO55042 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.49□□□□□ -0.41
SncaO55042 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SncaO55042 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SncaO55042 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SncaO55042 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SncaO55042 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SncaO55042 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SncaO55042 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SncaO55042 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SncaO55042 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SncaO55042 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.48□□□□□ -0.41
SncaO55042 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SncaO55042 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.48□□□□□ -0.41
SncaO55042 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SncaO55042 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.48□□□□□ -0.41
SncaO55042 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SncaO55042 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SncaO55042 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SncaO55042 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SncaO55042 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SncaO55042 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SncaO55042 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SncaO55042 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.48□□□□□ -0.41
SncaO55042 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.48□□□□□ -0.41
SncaO55042 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SncaO55042 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SncaO55042 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SncaO55042 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SncaO55042 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SncaO55042 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SncaO55042 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SncaO55042 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SncaO55042 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms