Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf13O54965 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf13O54965 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf13O54965 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.69□□□□□ -0.22
Rnf13O54965 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rnf13O54965 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.69□□□□□ -0.22
Rnf13O54965 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.69□□□□□ -0.22
Rnf13O54965 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf13O54965 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf13O54965 Mir3081-201ENSMUST00000175305 84 ntBASIC13.69□□□□□ -0.22
Rnf13O54965 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Rnf13O54965 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.69□□□□□ -0.22
Rnf13O54965 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf13O54965 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.69□□□□□ -0.22
Rnf13O54965 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf13O54965 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf13O54965 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf13O54965 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf13O54965 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf13O54965 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf13O54965 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf13O54965 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf13O54965 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf13O54965 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf13O54965 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.69□□□□□ -0.22
Rnf13O54965 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rnf13O54965 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf13O54965 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf13O54965 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rnf13O54965 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.68□□□□□ -0.22
Rnf13O54965 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rnf13O54965 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.68□□□□□ -0.22
Rnf13O54965 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.68□□□□□ -0.22
Rnf13O54965 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.68□□□□□ -0.22
Rnf13O54965 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rnf13O54965 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rnf13O54965 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Rnf13O54965 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.68□□□□□ -0.22
Rnf13O54965 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rnf13O54965 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf13O54965 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rnf13O54965 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Rnf13O54965 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rnf13O54965 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.67□□□□□ -0.22
Rnf13O54965 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Rnf13O54965 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.67□□□□□ -0.22
Rnf13O54965 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.67□□□□□ -0.22
Rnf13O54965 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.67□□□□□ -0.22
Rnf13O54965 Gm6659-201ENSMUST00000174752 547 ntBASIC13.67□□□□□ -0.22
Rnf13O54965 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.67□□□□□ -0.22
Rnf13O54965 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Rnf13O54965 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Rnf13O54965 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.67□□□□□ -0.22
Rnf13O54965 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rnf13O54965 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rnf13O54965 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms