Protein–RNA interactions for Protein: O54949

Nlk, Serine/threonine-protein kinase NLK, mousemouse

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NlkO54949 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NlkO54949 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NlkO54949 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
NlkO54949 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NlkO54949 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.53□□□□□ -0.24
NlkO54949 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NlkO54949 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NlkO54949 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.53□□□□□ -0.24
NlkO54949 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
NlkO54949 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.53□□□□□ -0.24
NlkO54949 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NlkO54949 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
NlkO54949 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NlkO54949 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NlkO54949 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NlkO54949 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NlkO54949 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NlkO54949 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NlkO54949 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NlkO54949 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
NlkO54949 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NlkO54949 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NlkO54949 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NlkO54949 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NlkO54949 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
NlkO54949 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NlkO54949 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NlkO54949 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NlkO54949 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NlkO54949 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
NlkO54949 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
NlkO54949 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NlkO54949 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NlkO54949 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NlkO54949 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NlkO54949 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
NlkO54949 Gm33142-201ENSMUST00000193913 867 ntBASIC13.52□□□□□ -0.25
NlkO54949 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
NlkO54949 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NlkO54949 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.52□□□□□ -0.25
NlkO54949 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
NlkO54949 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NlkO54949 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NlkO54949 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NlkO54949 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.52□□□□□ -0.25
NlkO54949 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NlkO54949 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NlkO54949 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NlkO54949 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
NlkO54949 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NlkO54949 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NlkO54949 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NlkO54949 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NlkO54949 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
NlkO54949 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NlkO54949 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.51□□□□□ -0.25
NlkO54949 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NlkO54949 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.51□□□□□ -0.25
NlkO54949 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NlkO54949 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.51□□□□□ -0.25
NlkO54949 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.51□□□□□ -0.25
NlkO54949 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
NlkO54949 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
NlkO54949 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NlkO54949 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NlkO54949 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NlkO54949 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NlkO54949 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NlkO54949 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
NlkO54949 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NlkO54949 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NlkO54949 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NlkO54949 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NlkO54949 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
NlkO54949 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms