Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Limk2O54785 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Limk2O54785 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Limk2O54785 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Limk2O54785 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Limk2O54785 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Limk2O54785 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Limk2O54785 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Limk2O54785 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Limk2O54785 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Limk2O54785 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Limk2O54785 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Limk2O54785 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Limk2O54785 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Limk2O54785 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Limk2O54785 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Limk2O54785 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Limk2O54785 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Limk2O54785 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Limk2O54785 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Limk2O54785 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Limk2O54785 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Limk2O54785 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.28■□□□□ 0.04
Limk2O54785 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Limk2O54785 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Limk2O54785 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.28■□□□□ 0.04
Limk2O54785 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.28■□□□□ 0.04
Limk2O54785 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Limk2O54785 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Limk2O54785 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Limk2O54785 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Limk2O54785 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.28■□□□□ 0.04
Limk2O54785 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Limk2O54785 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Limk2O54785 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Limk2O54785 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Limk2O54785 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.27■□□□□ 0.04
Limk2O54785 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Limk2O54785 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.27■□□□□ 0.04
Limk2O54785 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Limk2O54785 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Limk2O54785 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Limk2O54785 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Limk2O54785 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Limk2O54785 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Limk2O54785 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Limk2O54785 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Limk2O54785 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.27■□□□□ 0.04
Limk2O54785 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Limk2O54785 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.27■□□□□ 0.04
Limk2O54785 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.27■□□□□ 0.04
Limk2O54785 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Limk2O54785 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.27■□□□□ 0.04
Limk2O54785 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Limk2O54785 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Limk2O54785 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Limk2O54785 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Limk2O54785 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Limk2O54785 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Limk2O54785 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Limk2O54785 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Limk2O54785 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
Limk2O54785 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.26■□□□□ 0.03
Limk2O54785 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 Gm43767-201ENSMUST00000198933 381 ntBASIC15.26■□□□□ 0.03
Limk2O54785 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.26■□□□□ 0.03
Limk2O54785 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.26■□□□□ 0.03
Limk2O54785 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.26■□□□□ 0.03
Limk2O54785 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Limk2O54785 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Limk2O54785 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.25■□□□□ 0.03
Limk2O54785 Sybu-209ENSMUST00000228639 4113 ntBASIC15.25■□□□□ 0.03
Limk2O54785 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Limk2O54785 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Limk2O54785 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limk2O54785 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms