Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col15a1O35206 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col15a1O35206 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC19.17■□□□□ 0.66
Col15a1O35206 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col15a1O35206 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col15a1O35206 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Col15a1O35206 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC19.16■□□□□ 0.66
Col15a1O35206 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col15a1O35206 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Col15a1O35206 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col15a1O35206 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col15a1O35206 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col15a1O35206 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col15a1O35206 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col15a1O35206 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col15a1O35206 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col15a1O35206 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col15a1O35206 Gm8749-201ENSMUST00000117737 331 ntBASIC19.16■□□□□ 0.66
Col15a1O35206 Gm12138-201ENSMUST00000122180 951 ntBASIC19.16■□□□□ 0.66
Col15a1O35206 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC19.16■□□□□ 0.66
Col15a1O35206 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
Col15a1O35206 Gm3436-201ENSMUST00000179930 840 ntBASIC19.16■□□□□ 0.66
Col15a1O35206 Gm6944-201ENSMUST00000182449 1006 ntBASIC19.16■□□□□ 0.66
Col15a1O35206 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col15a1O35206 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col15a1O35206 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Col15a1O35206 Gm20445-201ENSMUST00000061905 565 ntBASIC19.16■□□□□ 0.66
Col15a1O35206 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col15a1O35206 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col15a1O35206 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col15a1O35206 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col15a1O35206 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col15a1O35206 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col15a1O35206 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col15a1O35206 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col15a1O35206 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col15a1O35206 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Col15a1O35206 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col15a1O35206 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC19.15■□□□□ 0.66
Col15a1O35206 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col15a1O35206 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC19.15■□□□□ 0.66
Col15a1O35206 Gm45453-201ENSMUST00000211758 853 ntBASIC19.15■□□□□ 0.66
Col15a1O35206 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC19.15■□□□□ 0.66
Col15a1O35206 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col15a1O35206 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Col15a1O35206 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col15a1O35206 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Col15a1O35206 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col15a1O35206 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col15a1O35206 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Col15a1O35206 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC19.14■□□□□ 0.66
Col15a1O35206 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col15a1O35206 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC19.14■□□□□ 0.65
Col15a1O35206 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Col15a1O35206 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col15a1O35206 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col15a1O35206 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col15a1O35206 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col15a1O35206 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col15a1O35206 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col15a1O35206 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col15a1O35206 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col15a1O35206 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col15a1O35206 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col15a1O35206 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC19.14■□□□□ 0.65
Col15a1O35206 Gm23984-201ENSMUST00000157139 203 ntBASIC19.14■□□□□ 0.65
Col15a1O35206 Gm9522-201ENSMUST00000182394 926 ntBASIC19.14■□□□□ 0.65
Col15a1O35206 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC19.14■□□□□ 0.65
Col15a1O35206 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col15a1O35206 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col15a1O35206 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col15a1O35206 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col15a1O35206 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col15a1O35206 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col15a1O35206 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col15a1O35206 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col15a1O35206 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col15a1O35206 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col15a1O35206 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Col15a1O35206 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col15a1O35206 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col15a1O35206 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col15a1O35206 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Col15a1O35206 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Col15a1O35206 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Col15a1O35206 Trav13-3-201ENSMUST00000117226 336 ntBASIC19.13■□□□□ 0.65
Col15a1O35206 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col15a1O35206 Gm37230-201ENSMUST00000194491 818 ntBASIC19.13■□□□□ 0.65
Col15a1O35206 Gm6745-201ENSMUST00000199216 526 ntBASIC19.13■□□□□ 0.65
Col15a1O35206 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Col15a1O35206 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col15a1O35206 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col15a1O35206 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col15a1O35206 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col15a1O35206 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col15a1O35206 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col15a1O35206 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col15a1O35206 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col15a1O35206 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col15a1O35206 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms