Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.05□□□□□ -0.32
Gfra3O35118 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gfra3O35118 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Gfra3O35118 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gfra3O35118 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gfra3O35118 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gfra3O35118 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gfra3O35118 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gfra3O35118 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.05□□□□□ -0.32
Gfra3O35118 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Gfra3O35118 Gm12008-201ENSMUST00000117791 755 ntBASIC13.05□□□□□ -0.32
Gfra3O35118 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Gfra3O35118 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gfra3O35118 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Gfra3O35118 Thap2-203ENSMUST00000218989 527 ntBASIC13.05□□□□□ -0.32
Gfra3O35118 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.05□□□□□ -0.32
Gfra3O35118 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gfra3O35118 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.05□□□□□ -0.32
Gfra3O35118 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Gfra3O35118 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Gfra3O35118 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Gfra3O35118 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gfra3O35118 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gfra3O35118 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gfra3O35118 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gfra3O35118 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Gfra3O35118 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.05□□□□□ -0.32
Gfra3O35118 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gfra3O35118 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Gfra3O35118 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gfra3O35118 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.04□□□□□ -0.32
Gfra3O35118 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Gfra3O35118 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.04□□□□□ -0.32
Gfra3O35118 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Gfra3O35118 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gfra3O35118 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Gfra3O35118 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gfra3O35118 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gfra3O35118 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gfra3O35118 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gfra3O35118 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gfra3O35118 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gfra3O35118 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gfra3O35118 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.03□□□□□ -0.32
Gfra3O35118 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.03□□□□□ -0.32
Gfra3O35118 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.03□□□□□ -0.32
Gfra3O35118 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.03□□□□□ -0.32
Gfra3O35118 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Gfra3O35118 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gfra3O35118 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Gfra3O35118 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gfra3O35118 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gfra3O35118 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gfra3O35118 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gfra3O35118 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gfra3O35118 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Gfra3O35118 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gfra3O35118 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gfra3O35118 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gfra3O35118 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gfra3O35118 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gfra3O35118 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gfra3O35118 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
Gfra3O35118 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Gfra3O35118 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Gfra3O35118 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Gfra3O35118 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.02□□□□□ -0.32
Gfra3O35118 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gfra3O35118 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Gfra3O35118 Gm23935-201ENSMUST00000102303 57 ntBASIC13.02□□□□□ -0.33
Gfra3O35118 Gm24270-201ENSMUST00000102326 57 ntBASIC13.02□□□□□ -0.33
Gfra3O35118 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gfra3O35118 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.02□□□□□ -0.33
Gfra3O35118 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gfra3O35118 Gm24245-201ENSMUST00000157318 57 ntBASIC13.02□□□□□ -0.33
Gfra3O35118 Gm27301-201ENSMUST00000184012 127 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms