Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Dctn1O08788 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dctn1O08788 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dctn1O08788 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Dctn1O08788 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Dctn1O08788 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC18.54■□□□□ 0.56
Dctn1O08788 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Dctn1O08788 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Dctn1O08788 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.54■□□□□ 0.56
Dctn1O08788 Mir8102-201ENSMUST00000184148 139 ntBASIC18.54■□□□□ 0.56
Dctn1O08788 Gm28630-201ENSMUST00000187806 498 ntBASIC18.54■□□□□ 0.56
Dctn1O08788 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dctn1O08788 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dctn1O08788 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dctn1O08788 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Dctn1O08788 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dctn1O08788 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Dctn1O08788 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Dctn1O08788 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Dctn1O08788 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Dctn1O08788 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Dctn1O08788 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.53■□□□□ 0.56
Dctn1O08788 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Dctn1O08788 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Dctn1O08788 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC18.53■□□□□ 0.56
Dctn1O08788 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Dctn1O08788 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC18.53■□□□□ 0.56
Dctn1O08788 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Dctn1O08788 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Dctn1O08788 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Dctn1O08788 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Dctn1O08788 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Dctn1O08788 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Dctn1O08788 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Dctn1O08788 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.53■□□□□ 0.56
Dctn1O08788 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Dctn1O08788 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Dctn1O08788 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC18.52■□□□□ 0.56
Dctn1O08788 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Dctn1O08788 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Dctn1O08788 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Dctn1O08788 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Dctn1O08788 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC18.52■□□□□ 0.56
Dctn1O08788 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Dctn1O08788 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Dctn1O08788 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Dctn1O08788 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.52■□□□□ 0.56
Dctn1O08788 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.52■□□□□ 0.56
Dctn1O08788 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC18.52■□□□□ 0.56
Dctn1O08788 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Dctn1O08788 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Dctn1O08788 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Dctn1O08788 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Dctn1O08788 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
Dctn1O08788 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Dctn1O08788 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Dctn1O08788 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Dctn1O08788 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.51■□□□□ 0.55
Dctn1O08788 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dctn1O08788 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dctn1O08788 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.51■□□□□ 0.55
Dctn1O08788 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dctn1O08788 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Dctn1O08788 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Dctn1O08788 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC18.51■□□□□ 0.55
Dctn1O08788 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Dctn1O08788 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Dctn1O08788 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Dctn1O08788 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Dctn1O08788 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC18.51■□□□□ 0.55
Dctn1O08788 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.51■□□□□ 0.55
Dctn1O08788 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Dctn1O08788 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dctn1O08788 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dctn1O08788 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.51■□□□□ 0.55
Dctn1O08788 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Dctn1O08788 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dctn1O08788 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dctn1O08788 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dctn1O08788 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dctn1O08788 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Dctn1O08788 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Dctn1O08788 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Dctn1O08788 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Dctn1O08788 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Dctn1O08788 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Dctn1O08788 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.5■□□□□ 0.55
Dctn1O08788 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Dctn1O08788 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Dctn1O08788 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.5■□□□□ 0.55
Dctn1O08788 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.5■□□□□ 0.55
Dctn1O08788 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Dctn1O08788 H2-Pa-201ENSMUST00000182803 626 ntBASIC18.5■□□□□ 0.55
Dctn1O08788 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Dctn1O08788 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Dctn1O08788 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.5■□□□□ 0.55
Dctn1O08788 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Dctn1O08788 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Dctn1O08788 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Dctn1O08788 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms