Protein–RNA interactions for Protein: O08665

Sema3a, Semaphorin-3A, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3aO08665 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sema3aO08665 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sema3aO08665 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Sema3aO08665 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sema3aO08665 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sema3aO08665 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sema3aO08665 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sema3aO08665 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sema3aO08665 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sema3aO08665 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sema3aO08665 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sema3aO08665 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sema3aO08665 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sema3aO08665 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sema3aO08665 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.23■□□□□ 0.03
Sema3aO08665 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.23■□□□□ 0.03
Sema3aO08665 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sema3aO08665 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sema3aO08665 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sema3aO08665 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Sema3aO08665 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sema3aO08665 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sema3aO08665 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sema3aO08665 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.23■□□□□ 0.03
Sema3aO08665 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sema3aO08665 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.23■□□□□ 0.03
Sema3aO08665 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sema3aO08665 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.23■□□□□ 0.03
Sema3aO08665 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.23■□□□□ 0.03
Sema3aO08665 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.23■□□□□ 0.03
Sema3aO08665 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.23■□□□□ 0.03
Sema3aO08665 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sema3aO08665 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sema3aO08665 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sema3aO08665 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Sema3aO08665 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sema3aO08665 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sema3aO08665 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sema3aO08665 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sema3aO08665 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sema3aO08665 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sema3aO08665 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sema3aO08665 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sema3aO08665 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.22■□□□□ 0.03
Sema3aO08665 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sema3aO08665 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sema3aO08665 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sema3aO08665 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sema3aO08665 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sema3aO08665 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sema3aO08665 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.22■□□□□ 0.03
Sema3aO08665 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.22■□□□□ 0.03
Sema3aO08665 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sema3aO08665 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.22■□□□□ 0.03
Sema3aO08665 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.22■□□□□ 0.03
Sema3aO08665 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sema3aO08665 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sema3aO08665 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sema3aO08665 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sema3aO08665 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.22■□□□□ 0.03
Sema3aO08665 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sema3aO08665 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sema3aO08665 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Sema3aO08665 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sema3aO08665 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Sema3aO08665 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sema3aO08665 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sema3aO08665 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sema3aO08665 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sema3aO08665 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.21■□□□□ 0.03
Sema3aO08665 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sema3aO08665 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sema3aO08665 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sema3aO08665 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sema3aO08665 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.21■□□□□ 0.03
Sema3aO08665 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sema3aO08665 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sema3aO08665 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sema3aO08665 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Sema3aO08665 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Sema3aO08665 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sema3aO08665 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.21■□□□□ 0.03
Sema3aO08665 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.21■□□□□ 0.03
Sema3aO08665 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sema3aO08665 Gm5364-201ENSMUST00000216789 889 ntBASIC15.21■□□□□ 0.03
Sema3aO08665 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.21■□□□□ 0.03
Sema3aO08665 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sema3aO08665 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sema3aO08665 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sema3aO08665 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Sema3aO08665 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sema3aO08665 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sema3aO08665 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sema3aO08665 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sema3aO08665 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Sema3aO08665 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sema3aO08665 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sema3aO08665 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sema3aO08665 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sema3aO08665 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms