Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp35M0QWN7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.19■□□□□ 0.18
Usp35M0QWN7 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.19■□□□□ 0.18
Usp35M0QWN7 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.19■□□□□ 0.18
Usp35M0QWN7 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.19■□□□□ 0.18
Usp35M0QWN7 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp35M0QWN7 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Rubie-203ENSMUST00000227803 2430 ntBASIC16.18■□□□□ 0.18
Usp35M0QWN7 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.18■□□□□ 0.18
Usp35M0QWN7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Gm17271-201ENSMUST00000165535 355 ntBASIC16.18■□□□□ 0.18
Usp35M0QWN7 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.18■□□□□ 0.18
Usp35M0QWN7 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.18■□□□□ 0.18
Usp35M0QWN7 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.18■□□□□ 0.18
Usp35M0QWN7 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.18■□□□□ 0.18
Usp35M0QWN7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp35M0QWN7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Usp35M0QWN7 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.17■□□□□ 0.18
Usp35M0QWN7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp35M0QWN7 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms