Protein–RNA interactions for Protein: E9Q9Y3

Ccdc7b, Coiled-coil domain-containing 7B, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7bE9Q9Y3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Gm7506-201ENSMUST00000207758 815 ntBASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ccdc7bE9Q9Y3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7bE9Q9Y3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc7bE9Q9Y3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7bE9Q9Y3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7bE9Q9Y3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7bE9Q9Y3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7bE9Q9Y3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7bE9Q9Y3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7bE9Q9Y3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7bE9Q9Y3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc7bE9Q9Y3 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.14□□□□□ -0.15
Ccdc7bE9Q9Y3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc7bE9Q9Y3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7bE9Q9Y3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7bE9Q9Y3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc7bE9Q9Y3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7bE9Q9Y3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc7bE9Q9Y3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7bE9Q9Y3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7bE9Q9Y3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7bE9Q9Y3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7bE9Q9Y3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.14□□□□□ -0.15
Ccdc7bE9Q9Y3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7bE9Q9Y3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Gm12134-201ENSMUST00000122109 520 ntBASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Mir8098-201ENSMUST00000184011 137 ntBASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Gm34391-201ENSMUST00000203706 907 ntBASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7bE9Q9Y3 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc7bE9Q9Y3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms