Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Ube4aE9Q735 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube4aE9Q735 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ube4aE9Q735 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube4aE9Q735 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ube4aE9Q735 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube4aE9Q735 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.04■□□□□ 0.48
Ube4aE9Q735 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ube4aE9Q735 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.04■□□□□ 0.48
Ube4aE9Q735 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC18.04■□□□□ 0.48
Ube4aE9Q735 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC18.04■□□□□ 0.48
Ube4aE9Q735 Gm12428-201ENSMUST00000119844 727 ntBASIC18.04■□□□□ 0.48
Ube4aE9Q735 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ube4aE9Q735 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.04■□□□□ 0.48
Ube4aE9Q735 Gm5626-201ENSMUST00000222151 1058 ntBASIC18.04■□□□□ 0.48
Ube4aE9Q735 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube4aE9Q735 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ube4aE9Q735 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube4aE9Q735 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube4aE9Q735 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube4aE9Q735 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube4aE9Q735 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube4aE9Q735 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube4aE9Q735 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Gm13823-201ENSMUST00000119930 345 ntBASIC18.03■□□□□ 0.48
Ube4aE9Q735 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Mir8102-201ENSMUST00000184148 139 ntBASIC18.03■□□□□ 0.48
Ube4aE9Q735 Mir6977-201ENSMUST00000184960 64 ntBASIC18.03■□□□□ 0.48
Ube4aE9Q735 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ube4aE9Q735 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ube4aE9Q735 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ube4aE9Q735 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ube4aE9Q735 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ube4aE9Q735 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ube4aE9Q735 Gm6944-201ENSMUST00000182449 1006 ntBASIC18.02■□□□□ 0.48
Ube4aE9Q735 Gm27437-201ENSMUST00000183429 107 ntBASIC18.02■□□□□ 0.48
Ube4aE9Q735 AC125206.2-201ENSMUST00000217454 574 ntBASIC18.02■□□□□ 0.48
Ube4aE9Q735 Wdyhv1-203ENSMUST00000226889 394 ntBASIC18.02■□□□□ 0.48
Ube4aE9Q735 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ube4aE9Q735 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ube4aE9Q735 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ube4aE9Q735 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ube4aE9Q735 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ube4aE9Q735 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ube4aE9Q735 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.02■□□□□ 0.47
Ube4aE9Q735 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ube4aE9Q735 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ube4aE9Q735 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ube4aE9Q735 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ube4aE9Q735 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ube4aE9Q735 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ube4aE9Q735 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Ube4aE9Q735 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ube4aE9Q735 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ube4aE9Q735 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Ube4aE9Q735 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ube4aE9Q735 CT025535.1-201ENSMUST00000227172 491 ntBASIC18.01■□□□□ 0.47
Ube4aE9Q735 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ube4aE9Q735 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ube4aE9Q735 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ube4aE9Q735 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Ube4aE9Q735 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ube4aE9Q735 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ube4aE9Q735 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18■□□□□ 0.47
Ube4aE9Q735 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Ube4aE9Q735 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Ube4aE9Q735 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ube4aE9Q735 Gm13464-201ENSMUST00000119418 935 ntBASIC18■□□□□ 0.47
Ube4aE9Q735 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC18■□□□□ 0.47
Ube4aE9Q735 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Ube4aE9Q735 Gm27533-201ENSMUST00000183800 152 ntBASIC18■□□□□ 0.47
Ube4aE9Q735 Mir7684-201ENSMUST00000183858 60 ntBASIC18■□□□□ 0.47
Ube4aE9Q735 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms