Protein–RNA interactions for Protein: E9Q3L6

4930579F01Rik, RIKEN cDNA 4930579F01 gene, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4930579F01RikE9Q3L6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
4930579F01RikE9Q3L6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
4930579F01RikE9Q3L6 Gm18958-201ENSMUST00000174258 762 ntBASIC13.63□□□□□ -0.23
4930579F01RikE9Q3L6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
4930579F01RikE9Q3L6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.63□□□□□ -0.23
4930579F01RikE9Q3L6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
4930579F01RikE9Q3L6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
4930579F01RikE9Q3L6 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.63□□□□□ -0.23
4930579F01RikE9Q3L6 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
4930579F01RikE9Q3L6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
4930579F01RikE9Q3L6 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
4930579F01RikE9Q3L6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
4930579F01RikE9Q3L6 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.63□□□□□ -0.23
4930579F01RikE9Q3L6 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
4930579F01RikE9Q3L6 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
4930579F01RikE9Q3L6 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
4930579F01RikE9Q3L6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
4930579F01RikE9Q3L6 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.63□□□□□ -0.23
4930579F01RikE9Q3L6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
4930579F01RikE9Q3L6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
4930579F01RikE9Q3L6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
4930579F01RikE9Q3L6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
4930579F01RikE9Q3L6 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Gm7213-201ENSMUST00000215977 950 ntBASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Gm7370-201ENSMUST00000219471 767 ntBASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
4930579F01RikE9Q3L6 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Gm21559-201ENSMUST00000220638 855 ntBASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Gm7367-201ENSMUST00000057611 492 ntBASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Gm8587-201ENSMUST00000076538 843 ntBASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
4930579F01RikE9Q3L6 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.6□□□□□ -0.23
4930579F01RikE9Q3L6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
4930579F01RikE9Q3L6 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
4930579F01RikE9Q3L6 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
4930579F01RikE9Q3L6 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
4930579F01RikE9Q3L6 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
4930579F01RikE9Q3L6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
4930579F01RikE9Q3L6 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
4930579F01RikE9Q3L6 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
4930579F01RikE9Q3L6 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms