Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf11E9PZM7 Gm13226-201ENSMUST00000117838 404 ntBASIC20.78■□□□□ 0.92
Scaf11E9PZM7 Gm42693-201ENSMUST00000196779 631 ntBASIC20.78■□□□□ 0.92
Scaf11E9PZM7 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf11E9PZM7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf11E9PZM7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf11E9PZM7 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf11E9PZM7 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf11E9PZM7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf11E9PZM7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf11E9PZM7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf11E9PZM7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf11E9PZM7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scaf11E9PZM7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC20.77■□□□□ 0.92
Scaf11E9PZM7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC20.77■□□□□ 0.92
Scaf11E9PZM7 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scaf11E9PZM7 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scaf11E9PZM7 Gm15198-201ENSMUST00000117283 177 ntBASIC20.77■□□□□ 0.92
Scaf11E9PZM7 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Scaf11E9PZM7 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scaf11E9PZM7 Gm45453-201ENSMUST00000211758 853 ntBASIC20.77■□□□□ 0.92
Scaf11E9PZM7 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC20.77■□□□□ 0.92
Scaf11E9PZM7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scaf11E9PZM7 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scaf11E9PZM7 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC20.77■□□□□ 0.91
Scaf11E9PZM7 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Scaf11E9PZM7 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Scaf11E9PZM7 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf11E9PZM7 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC20.76■□□□□ 0.91
Scaf11E9PZM7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf11E9PZM7 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf11E9PZM7 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf11E9PZM7 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC20.76■□□□□ 0.91
Scaf11E9PZM7 Gm8835-201ENSMUST00000173096 1169 ntBASIC20.76■□□□□ 0.91
Scaf11E9PZM7 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC20.76■□□□□ 0.91
Scaf11E9PZM7 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC20.76■□□□□ 0.91
Scaf11E9PZM7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC20.76■□□□□ 0.91
Scaf11E9PZM7 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Scaf11E9PZM7 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf11E9PZM7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Scaf11E9PZM7 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf11E9PZM7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf11E9PZM7 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf11E9PZM7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf11E9PZM7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scaf11E9PZM7 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Scaf11E9PZM7 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC20.75■□□□□ 0.91
Scaf11E9PZM7 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf11E9PZM7 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Scaf11E9PZM7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Scaf11E9PZM7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.75■□□□□ 0.91
Scaf11E9PZM7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf11E9PZM7 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Scaf11E9PZM7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf11E9PZM7 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf11E9PZM7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf11E9PZM7 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf11E9PZM7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf11E9PZM7 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Scaf11E9PZM7 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Scaf11E9PZM7 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC20.75■□□□□ 0.91
Scaf11E9PZM7 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf11E9PZM7 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf11E9PZM7 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf11E9PZM7 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Scaf11E9PZM7 Gm18827-201ENSMUST00000188341 790 ntBASIC20.75■□□□□ 0.91
Scaf11E9PZM7 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC20.75■□□□□ 0.91
Scaf11E9PZM7 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf11E9PZM7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scaf11E9PZM7 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf11E9PZM7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Scaf11E9PZM7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf11E9PZM7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf11E9PZM7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Scaf11E9PZM7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf11E9PZM7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf11E9PZM7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC20.74■□□□□ 0.91
Scaf11E9PZM7 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf11E9PZM7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf11E9PZM7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf11E9PZM7 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Scaf11E9PZM7 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf11E9PZM7 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Scaf11E9PZM7 AC165157.4-201ENSMUST00000220587 139 ntBASIC20.74■□□□□ 0.91
Scaf11E9PZM7 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf11E9PZM7 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Scaf11E9PZM7 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Scaf11E9PZM7 Gm10478-201ENSMUST00000084451 396 ntBASIC20.74■□□□□ 0.91
Scaf11E9PZM7 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf11E9PZM7 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scaf11E9PZM7 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf11E9PZM7 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf11E9PZM7 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Scaf11E9PZM7 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf11E9PZM7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC20.73■□□□□ 0.91
Scaf11E9PZM7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Scaf11E9PZM7 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf11E9PZM7 Gm12341-201ENSMUST00000119724 503 ntBASIC20.73■□□□□ 0.91
Scaf11E9PZM7 Snora78-201ENSMUST00000158630 128 ntBASIC20.73■□□□□ 0.91
Scaf11E9PZM7 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms