Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh17E9PXF0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh17E9PXF0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh17E9PXF0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdh17E9PXF0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh17E9PXF0 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.05□□□□□ -0.16
Pcdh17E9PXF0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Pcdh17E9PXF0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh17E9PXF0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.04□□□□□ -0.16
Pcdh17E9PXF0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Gm15920-201ENSMUST00000118998 402 ntBASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh17E9PXF0 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh17E9PXF0 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh17E9PXF0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh17E9PXF0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh17E9PXF0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh17E9PXF0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh17E9PXF0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh17E9PXF0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.02□□□□□ -0.16
Pcdh17E9PXF0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh17E9PXF0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh17E9PXF0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh17E9PXF0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.02□□□□□ -0.16
Pcdh17E9PXF0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.02□□□□□ -0.16
Pcdh17E9PXF0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh17E9PXF0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Pcdh17E9PXF0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pcdh17E9PXF0 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh17E9PXF0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh17E9PXF0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh17E9PXF0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Pcdh17E9PXF0 Gm10499-201ENSMUST00000174094 934 ntBASIC14.02□□□□□ -0.17
Pcdh17E9PXF0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdh17E9PXF0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh17E9PXF0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pcdh17E9PXF0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh17E9PXF0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pcdh17E9PXF0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.02□□□□□ -0.17
Pcdh17E9PXF0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh17E9PXF0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
Pcdh17E9PXF0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh17E9PXF0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh17E9PXF0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh17E9PXF0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh17E9PXF0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh17E9PXF0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.01□□□□□ -0.17
Pcdh17E9PXF0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms