Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syce3B5KM66 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syce3B5KM66 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syce3B5KM66 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syce3B5KM66 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.28■□□□□ 0.36
Syce3B5KM66 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syce3B5KM66 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Syce3B5KM66 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.28■□□□□ 0.36
Syce3B5KM66 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Syce3B5KM66 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.28■□□□□ 0.36
Syce3B5KM66 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.28■□□□□ 0.36
Syce3B5KM66 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syce3B5KM66 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syce3B5KM66 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syce3B5KM66 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Syce3B5KM66 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Syce3B5KM66 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syce3B5KM66 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syce3B5KM66 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Syce3B5KM66 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syce3B5KM66 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syce3B5KM66 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syce3B5KM66 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syce3B5KM66 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syce3B5KM66 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syce3B5KM66 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.27■□□□□ 0.36
Syce3B5KM66 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syce3B5KM66 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syce3B5KM66 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syce3B5KM66 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syce3B5KM66 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syce3B5KM66 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
Syce3B5KM66 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syce3B5KM66 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Syce3B5KM66 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.27■□□□□ 0.36
Syce3B5KM66 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Syce3B5KM66 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.27■□□□□ 0.36
Syce3B5KM66 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Syce3B5KM66 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syce3B5KM66 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Syce3B5KM66 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Syce3B5KM66 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Syce3B5KM66 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Syce3B5KM66 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Syce3B5KM66 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Syce3B5KM66 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Syce3B5KM66 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syce3B5KM66 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syce3B5KM66 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Syce3B5KM66 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syce3B5KM66 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syce3B5KM66 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syce3B5KM66 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Syce3B5KM66 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syce3B5KM66 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.26■□□□□ 0.35
Syce3B5KM66 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syce3B5KM66 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syce3B5KM66 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Syce3B5KM66 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syce3B5KM66 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syce3B5KM66 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.26■□□□□ 0.35
Syce3B5KM66 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.26■□□□□ 0.35
Syce3B5KM66 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.26■□□□□ 0.35
Syce3B5KM66 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syce3B5KM66 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syce3B5KM66 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syce3B5KM66 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC17.26■□□□□ 0.35
Syce3B5KM66 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Syce3B5KM66 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syce3B5KM66 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syce3B5KM66 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Syce3B5KM66 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syce3B5KM66 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Syce3B5KM66 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syce3B5KM66 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syce3B5KM66 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Syce3B5KM66 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syce3B5KM66 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syce3B5KM66 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syce3B5KM66 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Syce3B5KM66 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syce3B5KM66 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syce3B5KM66 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Syce3B5KM66 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syce3B5KM66 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syce3B5KM66 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syce3B5KM66 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Syce3B5KM66 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syce3B5KM66 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syce3B5KM66 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syce3B5KM66 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syce3B5KM66 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Syce3B5KM66 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syce3B5KM66 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Syce3B5KM66 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Syce3B5KM66 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syce3B5KM66 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syce3B5KM66 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Syce3B5KM66 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Syce3B5KM66 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms