Protein–RNA interactions for Protein: B1B1D3

Zfp40, Zinc finger protein 40, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp40B1B1D3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp40B1B1D3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp40B1B1D3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Zfp40B1B1D3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
Zfp40B1B1D3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.1■□□□□ 0.01
Zfp40B1B1D3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp40B1B1D3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp40B1B1D3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp40B1B1D3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp40B1B1D3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp40B1B1D3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp40B1B1D3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp40B1B1D3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp40B1B1D3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Zfp40B1B1D3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp40B1B1D3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp40B1B1D3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zfp40B1B1D3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Gm14767-201ENSMUST00000121559 586 ntBASIC15.09■□□□□ 0.01
Zfp40B1B1D3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Mir7085-201ENSMUST00000184353 66 ntBASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Gm27838-201ENSMUST00000184829 128 ntBASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Gm28630-201ENSMUST00000187806 498 ntBASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Gm29541-201ENSMUST00000191351 678 ntBASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zfp40B1B1D3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zfp40B1B1D3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zfp40B1B1D3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Zfp40B1B1D3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zfp40B1B1D3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zfp40B1B1D3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Zfp40B1B1D3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.08■□□□□ 0.01
Zfp40B1B1D3 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zfp40B1B1D3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.08■□□□□ 0.01
Zfp40B1B1D3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Zfp40B1B1D3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zfp40B1B1D3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Zfp40B1B1D3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.08■□□□□ 0
Zfp40B1B1D3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zfp40B1B1D3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Zfp40B1B1D3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.08■□□□□ 0
Zfp40B1B1D3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.08■□□□□ 0
Zfp40B1B1D3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Zfp40B1B1D3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.08■□□□□ 0
Zfp40B1B1D3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Zfp40B1B1D3 Gm23984-201ENSMUST00000157139 203 ntBASIC15.08■□□□□ 0
Zfp40B1B1D3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.08■□□□□ 0
Zfp40B1B1D3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zfp40B1B1D3 Gm18737-201ENSMUST00000173594 937 ntBASIC15.08■□□□□ 0
Zfp40B1B1D3 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.08■□□□□ 0
Zfp40B1B1D3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.08■□□□□ 0
Zfp40B1B1D3 Gm6218-201ENSMUST00000219812 628 ntBASIC15.08■□□□□ 0
Zfp40B1B1D3 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.08■□□□□ 0
Zfp40B1B1D3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zfp40B1B1D3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.08■□□□□ 0
Zfp40B1B1D3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zfp40B1B1D3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zfp40B1B1D3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.08■□□□□ 0
Zfp40B1B1D3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zfp40B1B1D3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zfp40B1B1D3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.08■□□□□ 0
Zfp40B1B1D3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zfp40B1B1D3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Zfp40B1B1D3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zfp40B1B1D3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zfp40B1B1D3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Zfp40B1B1D3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Zfp40B1B1D3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zfp40B1B1D3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms