Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn7aB1AYL1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scn7aB1AYL1 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Scn7aB1AYL1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn7aB1AYL1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Scn7aB1AYL1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn7aB1AYL1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scn7aB1AYL1 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn7aB1AYL1 Gm15678-201ENSMUST00000117573 960 ntBASIC19.18■□□□□ 0.66
Scn7aB1AYL1 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn7aB1AYL1 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn7aB1AYL1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn7aB1AYL1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Scn7aB1AYL1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn7aB1AYL1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn7aB1AYL1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn7aB1AYL1 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn7aB1AYL1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn7aB1AYL1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn7aB1AYL1 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Scn7aB1AYL1 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn7aB1AYL1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn7aB1AYL1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn7aB1AYL1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn7aB1AYL1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Gm45668-201ENSMUST00000211271 493 ntBASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn7aB1AYL1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Gm6916-202ENSMUST00000205523 195 ntBASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn7aB1AYL1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn7aB1AYL1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn7aB1AYL1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn7aB1AYL1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn7aB1AYL1 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn7aB1AYL1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn7aB1AYL1 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC19.16■□□□□ 0.66
Scn7aB1AYL1 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Scn7aB1AYL1 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC19.16■□□□□ 0.66
Scn7aB1AYL1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Scn7aB1AYL1 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Scn7aB1AYL1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scn7aB1AYL1 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn7aB1AYL1 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Scn7aB1AYL1 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Scn7aB1AYL1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn7aB1AYL1 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Scn7aB1AYL1 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Scn7aB1AYL1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC19.16■□□□□ 0.66
Scn7aB1AYL1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn7aB1AYL1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.15■□□□□ 0.66
Scn7aB1AYL1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scn7aB1AYL1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC19.15■□□□□ 0.66
Scn7aB1AYL1 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Scn7aB1AYL1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Scn7aB1AYL1 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.15■□□□□ 0.66
Scn7aB1AYL1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn7aB1AYL1 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Scn7aB1AYL1 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Scn7aB1AYL1 Gm33320-201ENSMUST00000192232 530 ntBASIC19.15■□□□□ 0.66
Scn7aB1AYL1 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn7aB1AYL1 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC19.15■□□□□ 0.66
Scn7aB1AYL1 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn7aB1AYL1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Scn7aB1AYL1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn7aB1AYL1 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scn7aB1AYL1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scn7aB1AYL1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn7aB1AYL1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn7aB1AYL1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn7aB1AYL1 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn7aB1AYL1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Scn7aB1AYL1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scn7aB1AYL1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scn7aB1AYL1 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scn7aB1AYL1 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scn7aB1AYL1 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Scn7aB1AYL1 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.66
Scn7aB1AYL1 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Scn7aB1AYL1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn7aB1AYL1 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms