Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a5A6H584 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a5A6H584 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.29□□□□□ -0.6
Col6a5A6H584 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Col6a5A6H584 Gm12134-201ENSMUST00000122109 520 ntBASIC11.29□□□□□ -0.6
Col6a5A6H584 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a5A6H584 Gm27514-201ENSMUST00000183692 110 ntBASIC11.29□□□□□ -0.6
Col6a5A6H584 Mir7654-201ENSMUST00000185082 70 ntBASIC11.29□□□□□ -0.6
Col6a5A6H584 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a5A6H584 Gm5161-201ENSMUST00000075243 853 ntBASIC11.29□□□□□ -0.6
Col6a5A6H584 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a5A6H584 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a5A6H584 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a5A6H584 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a5A6H584 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Col6a5A6H584 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a5A6H584 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.28□□□□□ -0.6
Col6a5A6H584 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a5A6H584 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a5A6H584 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a5A6H584 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a5A6H584 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a5A6H584 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a5A6H584 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a5A6H584 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
Col6a5A6H584 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Col6a5A6H584 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a5A6H584 Gm27572-201ENSMUST00000183702 255 ntBASIC11.28□□□□□ -0.6
Col6a5A6H584 Gm27847-201ENSMUST00000183711 107 ntBASIC11.28□□□□□ -0.6
Col6a5A6H584 Gm27375-201ENSMUST00000183799 107 ntBASIC11.28□□□□□ -0.6
Col6a5A6H584 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Col6a5A6H584 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a5A6H584 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a5A6H584 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.28□□□□□ -0.6
Col6a5A6H584 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC11.28□□□□□ -0.6
Col6a5A6H584 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a5A6H584 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a5A6H584 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a5A6H584 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.28□□□□□ -0.6
Col6a5A6H584 Gm27501-201ENSMUST00000183599 107 ntBASIC11.28□□□□□ -0.6
Col6a5A6H584 Gm27631-201ENSMUST00000184163 466 ntBASIC11.28□□□□□ -0.6
Col6a5A6H584 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.28□□□□□ -0.6
Col6a5A6H584 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a5A6H584 Gm7561-201ENSMUST00000211203 886 ntBASIC11.28□□□□□ -0.6
Col6a5A6H584 Gm9823-201ENSMUST00000051212 327 ntBASIC11.28□□□□□ -0.6
Col6a5A6H584 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a5A6H584 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC11.28□□□□□ -0.6
Col6a5A6H584 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a5A6H584 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a5A6H584 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a5A6H584 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC11.28□□□□□ -0.6
Col6a5A6H584 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a5A6H584 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col6a5A6H584 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col6a5A6H584 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Col6a5A6H584 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col6a5A6H584 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col6a5A6H584 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Col6a5A6H584 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col6a5A6H584 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col6a5A6H584 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.27□□□□□ -0.6
Col6a5A6H584 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col6a5A6H584 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Col6a5A6H584 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Col6a5A6H584 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col6a5A6H584 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Col6a5A6H584 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col6a5A6H584 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Col6a5A6H584 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a5A6H584 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a5A6H584 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.27□□□□□ -0.61
Col6a5A6H584 Gm5279-201ENSMUST00000199575 745 ntBASIC11.27□□□□□ -0.61
Col6a5A6H584 Gm6013-201ENSMUST00000212264 699 ntBASIC11.27□□□□□ -0.61
Col6a5A6H584 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.27□□□□□ -0.61
Col6a5A6H584 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a5A6H584 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC11.27□□□□□ -0.61
Col6a5A6H584 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a5A6H584 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a5A6H584 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a5A6H584 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC11.27□□□□□ -0.61
Col6a5A6H584 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a5A6H584 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a5A6H584 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Col6a5A6H584 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a5A6H584 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a5A6H584 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a5A6H584 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a5A6H584 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a5A6H584 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Col6a5A6H584 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Col6a5A6H584 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Col6a5A6H584 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a5A6H584 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.26□□□□□ -0.61
Col6a5A6H584 Gm27516-201ENSMUST00000184237 98 ntBASIC11.26□□□□□ -0.61
Col6a5A6H584 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Col6a5A6H584 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.26□□□□□ -0.61
Col6a5A6H584 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.26□□□□□ -0.61
Col6a5A6H584 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.26□□□□□ -0.61
Col6a5A6H584 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a5A6H584 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms