Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn1aA2APX8 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn1aA2APX8 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm13616-201ENSMUST00000120600 222 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm25349-201ENSMUST00000177728 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm23616-201ENSMUST00000177797 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm25871-201ENSMUST00000177816 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm24752-201ENSMUST00000178240 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm24496-201ENSMUST00000178287 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm25649-201ENSMUST00000178476 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm25548-201ENSMUST00000178681 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm23147-201ENSMUST00000178841 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm26095-201ENSMUST00000179270 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm22171-201ENSMUST00000179283 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm23936-201ENSMUST00000179354 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm22619-201ENSMUST00000179516 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm25255-201ENSMUST00000179579 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm24755-201ENSMUST00000179691 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm26506-201ENSMUST00000179692 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm25086-201ENSMUST00000179931 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm23243-201ENSMUST00000180047 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm24659-201ENSMUST00000180212 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm24169-201ENSMUST00000180244 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm23689-201ENSMUST00000180354 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm27359-201ENSMUST00000184153 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm27785-201ENSMUST00000184268 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm27466-201ENSMUST00000184396 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Gm27703-201ENSMUST00000184836 110 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Scn1aA2APX8 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.74■□□□□ 0.11
Scn1aA2APX8 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn1aA2APX8 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn1aA2APX8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn1aA2APX8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn1aA2APX8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Scn1aA2APX8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn1aA2APX8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Scn1aA2APX8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn1aA2APX8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn1aA2APX8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.73■□□□□ 0.11
Scn1aA2APX8 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn1aA2APX8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.73■□□□□ 0.11
Scn1aA2APX8 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Mir6956-201ENSMUST00000183598 62 ntBASIC15.73■□□□□ 0.11
Scn1aA2APX8 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.73■□□□□ 0.11
Scn1aA2APX8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn1aA2APX8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.73■□□□□ 0.11
Scn1aA2APX8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn1aA2APX8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn1aA2APX8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Gm25948-201ENSMUST00000175334 112 ntBASIC15.72■□□□□ 0.11
Scn1aA2APX8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.72■□□□□ 0.11
Scn1aA2APX8 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms