Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Gm6222-201ENSMUST00000120787 396 ntBASIC7.82□□□□□ -1.16
Ubr4A2AN08 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Gm37519-201ENSMUST00000191687 2210 ntBASIC7.82□□□□□ -1.16
Ubr4A2AN08 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Gm12948-201ENSMUST00000119406 682 ntBASIC7.82□□□□□ -1.16
Ubr4A2AN08 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC7.82□□□□□ -1.16
Ubr4A2AN08 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC7.82□□□□□ -1.16
Ubr4A2AN08 Gm6621-201ENSMUST00000193251 772 ntBASIC7.82□□□□□ -1.16
Ubr4A2AN08 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Gm17889-201ENSMUST00000198410 598 ntBASIC7.82□□□□□ -1.16
Ubr4A2AN08 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC7.82□□□□□ -1.16
Ubr4A2AN08 AC156016.3-201ENSMUST00000228623 344 ntBASIC7.82□□□□□ -1.16
Ubr4A2AN08 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Gm11667-201ENSMUST00000119828 486 ntBASIC7.82□□□□□ -1.16
Ubr4A2AN08 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Ubr4A2AN08 Gm10339-203ENSMUST00000225409 1671 ntBASIC7.81□□□□□ -1.16
Ubr4A2AN08 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ubr4A2AN08 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ubr4A2AN08 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Gm11783-201ENSMUST00000119549 885 ntBASIC7.81□□□□□ -1.16
Ubr4A2AN08 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Ubr4A2AN08 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Gm44364-201ENSMUST00000198368 141 ntBASIC7.81□□□□□ -1.16
Ubr4A2AN08 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Ubr4A2AN08 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Mir6923-201ENSMUST00000184592 72 ntBASIC7.81□□□□□ -1.16
Ubr4A2AN08 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC7.81□□□□□ -1.16
Ubr4A2AN08 Gm5069-202ENSMUST00000192714 1011 ntBASIC7.81□□□□□ -1.16
Ubr4A2AN08 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms