Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Shroom2A2ALU4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC23.39■■□□□ 1.34
Shroom2A2ALU4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Shroom2A2ALU4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Shroom2A2ALU4 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Shroom2A2ALU4 Gm15393-201ENSMUST00000120499 219 ntBASIC23.39■■□□□ 1.34
Shroom2A2ALU4 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC23.39■■□□□ 1.34
Shroom2A2ALU4 Gm24644-201ENSMUST00000157114 139 ntBASIC23.39■■□□□ 1.34
Shroom2A2ALU4 Cts7-204ENSMUST00000225321 1257 ntBASIC23.39■■□□□ 1.34
Shroom2A2ALU4 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Shroom2A2ALU4 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Shroom2A2ALU4 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Shroom2A2ALU4 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC23.39■■□□□ 1.33
Shroom2A2ALU4 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Shroom2A2ALU4 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Shroom2A2ALU4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Shroom2A2ALU4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Shroom2A2ALU4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
Shroom2A2ALU4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC23.38■■□□□ 1.33
Shroom2A2ALU4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
Shroom2A2ALU4 Gm22018-201ENSMUST00000104357 131 ntBASIC23.38■■□□□ 1.33
Shroom2A2ALU4 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Shroom2A2ALU4 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Shroom2A2ALU4 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Shroom2A2ALU4 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC23.38■■□□□ 1.33
Shroom2A2ALU4 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC23.38■■□□□ 1.33
Shroom2A2ALU4 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Shroom2A2ALU4 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Shroom2A2ALU4 AU022133-201ENSMUST00000200601 873 ntBASIC23.38■■□□□ 1.33
Shroom2A2ALU4 AC155258.1-201ENSMUST00000219303 253 ntBASIC23.38■■□□□ 1.33
Shroom2A2ALU4 AC121804.3-201ENSMUST00000223420 295 ntBASIC23.38■■□□□ 1.33
Shroom2A2ALU4 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Shroom2A2ALU4 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC23.38■■□□□ 1.33
Shroom2A2ALU4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Shroom2A2ALU4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Shroom2A2ALU4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Shroom2A2ALU4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Shroom2A2ALU4 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC23.37■■□□□ 1.33
Shroom2A2ALU4 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Shroom2A2ALU4 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC23.37■■□□□ 1.33
Shroom2A2ALU4 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC23.37■■□□□ 1.33
Shroom2A2ALU4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Shroom2A2ALU4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Shroom2A2ALU4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Shroom2A2ALU4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Shroom2A2ALU4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Shroom2A2ALU4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Shroom2A2ALU4 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Shroom2A2ALU4 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
Shroom2A2ALU4 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Shroom2A2ALU4 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC23.36■■□□□ 1.33
Shroom2A2ALU4 Gm44364-201ENSMUST00000198368 141 ntBASIC23.36■■□□□ 1.33
Shroom2A2ALU4 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Shroom2A2ALU4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Shroom2A2ALU4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Shroom2A2ALU4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Shroom2A2ALU4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Shroom2A2ALU4 Gm12997-201ENSMUST00000120207 640 ntBASIC23.36■■□□□ 1.33
Shroom2A2ALU4 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC23.36■■□□□ 1.33
Shroom2A2ALU4 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Shroom2A2ALU4 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC23.36■■□□□ 1.33
Shroom2A2ALU4 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC23.36■■□□□ 1.33
Shroom2A2ALU4 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Shroom2A2ALU4 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Shroom2A2ALU4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Shroom2A2ALU4 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Shroom2A2ALU4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Shroom2A2ALU4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC23.35■■□□□ 1.33
Shroom2A2ALU4 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Shroom2A2ALU4 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Shroom2A2ALU4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Shroom2A2ALU4 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Shroom2A2ALU4 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Shroom2A2ALU4 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC23.35■■□□□ 1.33
Shroom2A2ALU4 Rps4l-202ENSMUST00000204242 789 ntBASIC23.35■■□□□ 1.33
Shroom2A2ALU4 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC23.35■■□□□ 1.33
Shroom2A2ALU4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Shroom2A2ALU4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Shroom2A2ALU4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Shroom2A2ALU4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Shroom2A2ALU4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Shroom2A2ALU4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Shroom2A2ALU4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Shroom2A2ALU4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Shroom2A2ALU4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Shroom2A2ALU4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Shroom2A2ALU4 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Shroom2A2ALU4 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC23.34■■□□□ 1.33
Shroom2A2ALU4 Gm5363-201ENSMUST00000211927 938 ntBASIC23.34■■□□□ 1.33
Shroom2A2ALU4 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Shroom2A2ALU4 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Shroom2A2ALU4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
Shroom2A2ALU4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Shroom2A2ALU4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Shroom2A2ALU4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Shroom2A2ALU4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Shroom2A2ALU4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Shroom2A2ALU4 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Shroom2A2ALU4 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Shroom2A2ALU4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms