Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Gm8097-201ENSMUST00000117903 829 ntBASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Gm27357-201ENSMUST00000183754 135 ntBASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-1A0N8R1 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12-1A0N8R1 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav12-1A0N8R1 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav12-1A0N8R1 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav12-1A0N8R1 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav12-1A0N8R1 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms