Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm8318-201ENSMUST00000182954 872 ntBASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm37305-201ENSMUST00000195714 4279 ntBASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm25990-201ENSMUST00000102440 86 ntBASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm7153-201ENSMUST00000117092 455 ntBASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm15173-201ENSMUST00000122049 433 ntBASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 AC159106.1-201ENSMUST00000224421 690 ntBASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm16425-201ENSMUST00000118143 3130 ntBASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm5049-201ENSMUST00000195878 1590 ntBASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm10584-201ENSMUST00000207036 2628 ntBASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm6089-201ENSMUST00000197666 938 ntBASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm7556-201ENSMUST00000201178 1084 ntBASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Rps4l-201ENSMUST00000071745 943 ntBASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm3928-201ENSMUST00000121141 1307 ntBASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms