Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gm21009-201ENSMUST00000197169 1669 ntBASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gm26039-201ENSMUST00000158152 144 ntBASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Arhgef4-208ENSMUST00000211073 171 ntBASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 AC112142.1-201ENSMUST00000228796 918 ntBASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gm27011-201ENSMUST00000182352 972 ntBASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Mir1668-201ENSMUST00000184114 107 ntBASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 AC153881.1-201ENSMUST00000214448 284 ntBASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-3A0A0B4J1H2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms