Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC10.68□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Gm38318-201ENSMUST00000195769 1706 ntBASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Gm25745-201ENSMUST00000174945 133 ntBASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Gm19164-201ENSMUST00000210667 640 ntBASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 AC154471.1-201ENSMUST00000224418 436 ntBASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Vti1a-206ENSMUST00000225529 1244 ntBASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Ksr1-207ENSMUST00000226282 5260 ntBASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-11A0A0A6YWI9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms