Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Gm4899-201ENSMUST00000178708 719 ntBASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6-4A0A075B6B4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 AC131709.1-201ENSMUST00000224731 1180 ntBASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Gm43352-201ENSMUST00000196419 3065 ntBASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav6-4A0A075B6B4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms