Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav18A0A075B656 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav18A0A075B656 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Gm15358-201ENSMUST00000119249 520 ntBASIC12.37□□□□□ -0.43
Trav18A0A075B656 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.37□□□□□ -0.43
Trav18A0A075B656 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav18A0A075B656 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav18A0A075B656 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms