Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 AC120002.2-201ENSMUST00000220205 773 ntBASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Il3ra-202ENSMUST00000223589 738 ntBASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav3-4A0A075B654 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Gm42555-201ENSMUST00000199304 1039 ntBASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Gm42545-201ENSMUST00000202755 922 ntBASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-4A0A075B654 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 AC163280.1-201ENSMUST00000228194 1100 ntBASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms