Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm15794-201ENSMUST00000120182 631 ntBASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Mir6982-201ENSMUST00000184354 68 ntBASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Mir3081-201ENSMUST00000175305 84 ntBASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms