Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav4n-4A0A075B615 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Gm12085-201ENSMUST00000119263 940 ntBASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav4n-4A0A075B615 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav4n-4A0A075B615 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav4n-4A0A075B615 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav4n-4A0A075B615 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
Trav4n-4A0A075B615 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav4n-4A0A075B615 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav4n-4A0A075B615 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav4n-4A0A075B615 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC10.46□□□□□ -0.74
Trav4n-4A0A075B615 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav4n-4A0A075B615 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav4n-4A0A075B615 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav4n-4A0A075B615 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav4n-4A0A075B615 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav4n-4A0A075B615 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC10.46□□□□□ -0.74
Trav4n-4A0A075B615 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav4n-4A0A075B615 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav4n-4A0A075B615 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav4n-4A0A075B615 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav4n-4A0A075B615 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav4n-4A0A075B615 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trav4n-4A0A075B615 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav4n-4A0A075B615 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms