Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
Trbv4A0A075B5I2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.12■□□□□ 0.01
Trbv4A0A075B5I2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv4A0A075B5I2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv4A0A075B5I2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv4A0A075B5I2 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.12■□□□□ 0.01
Trbv4A0A075B5I2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trbv4A0A075B5I2 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.12■□□□□ 0.01
Trbv4A0A075B5I2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv4A0A075B5I2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv4A0A075B5I2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv4A0A075B5I2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv4A0A075B5I2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Mir5131-201ENSMUST00000175426 93 ntBASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv4A0A075B5I2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Mir5126-201ENSMUST00000175513 77 ntBASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Gm15590-201ENSMUST00000078419 552 ntBASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv4A0A075B5I2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms