Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb2S4R1M3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Gm45167-201ENSMUST00000208007 322 ntBASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb2S4R1M3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.1■□□□□ 0.01
H2afb2S4R1M3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb2S4R1M3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb2S4R1M3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.09■□□□□ 0.01
H2afb2S4R1M3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb2S4R1M3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
H2afb2S4R1M3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb2S4R1M3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb2S4R1M3 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb2S4R1M3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.09■□□□□ 0.01
H2afb2S4R1M3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb2S4R1M3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb2S4R1M3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb2S4R1M3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
H2afb2S4R1M3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.09■□□□□ 0.01
H2afb2S4R1M3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.09■□□□□ 0.01
H2afb2S4R1M3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
H2afb2S4R1M3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb2S4R1M3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms