Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Mir449b-201ENSMUST00000104833 80 ntBASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcb1Q9Z0H3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Mir6956-201ENSMUST00000183598 62 ntBASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Gm38225-201ENSMUST00000194001 393 ntBASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcb1Q9Z0H3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Gm27430-201ENSMUST00000184585 107 ntBASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Gm44333-201ENSMUST00000197168 107 ntBASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcb1Q9Z0H3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms