Protein–RNA interactions for Protein: Q9WUZ7

Sh3bgr, SH3 domain-binding glutamic acid-rich protein, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3bgrQ9WUZ7 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3bgrQ9WUZ7 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3bgrQ9WUZ7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3bgrQ9WUZ7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3bgrQ9WUZ7 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3bgrQ9WUZ7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3bgrQ9WUZ7 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3bgrQ9WUZ7 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Sh3bgrQ9WUZ7 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3bgrQ9WUZ7 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh3bgrQ9WUZ7 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Sh3bgrQ9WUZ7 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Sh3bgrQ9WUZ7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh3bgrQ9WUZ7 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh3bgrQ9WUZ7 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Sh3bgrQ9WUZ7 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3bgrQ9WUZ7 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3bgrQ9WUZ7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Sh3bgrQ9WUZ7 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.33■□□□□ 0.36
Sh3bgrQ9WUZ7 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3bgrQ9WUZ7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Sh3bgrQ9WUZ7 Mir3081-201ENSMUST00000175305 84 ntBASIC17.33■□□□□ 0.36
Sh3bgrQ9WUZ7 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3bgrQ9WUZ7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3bgrQ9WUZ7 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3bgrQ9WUZ7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.33■□□□□ 0.36
Sh3bgrQ9WUZ7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3bgrQ9WUZ7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.33■□□□□ 0.36
Sh3bgrQ9WUZ7 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3bgrQ9WUZ7 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.33■□□□□ 0.36
Sh3bgrQ9WUZ7 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.33■□□□□ 0.36
Sh3bgrQ9WUZ7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3bgrQ9WUZ7 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Sh3bgrQ9WUZ7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Gm10231-201ENSMUST00000181584 441 ntBASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Gm10175-202ENSMUST00000208752 441 ntBASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3bgrQ9WUZ7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3bgrQ9WUZ7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Sh3bgrQ9WUZ7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms