Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.78□□□□□ -0.52
CcsQ9WU84 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC11.78□□□□□ -0.52
CcsQ9WU84 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.78□□□□□ -0.52
CcsQ9WU84 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC11.78□□□□□ -0.52
CcsQ9WU84 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC11.78□□□□□ -0.52
CcsQ9WU84 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 Gm37722-201ENSMUST00000193757 208 ntBASIC11.78□□□□□ -0.52
CcsQ9WU84 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.78□□□□□ -0.52
CcsQ9WU84 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 Gm7367-201ENSMUST00000057611 492 ntBASIC11.78□□□□□ -0.52
CcsQ9WU84 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
CcsQ9WU84 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
CcsQ9WU84 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.78□□□□□ -0.52
CcsQ9WU84 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
CcsQ9WU84 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CcsQ9WU84 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcsQ9WU84 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CcsQ9WU84 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CcsQ9WU84 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CcsQ9WU84 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
CcsQ9WU84 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CcsQ9WU84 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
CcsQ9WU84 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
CcsQ9WU84 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
CcsQ9WU84 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CcsQ9WU84 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CcsQ9WU84 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
CcsQ9WU84 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
CcsQ9WU84 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcsQ9WU84 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcsQ9WU84 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcsQ9WU84 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CcsQ9WU84 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcsQ9WU84 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcsQ9WU84 Gm14859-201ENSMUST00000117752 357 ntBASIC11.77□□□□□ -0.53
CcsQ9WU84 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CcsQ9WU84 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.77□□□□□ -0.53
CcsQ9WU84 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.77□□□□□ -0.53
CcsQ9WU84 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
CcsQ9WU84 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcsQ9WU84 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcsQ9WU84 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcsQ9WU84 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcsQ9WU84 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcsQ9WU84 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcsQ9WU84 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC11.77□□□□□ -0.53
CcsQ9WU84 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcsQ9WU84 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.77□□□□□ -0.53
CcsQ9WU84 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.77□□□□□ -0.53
CcsQ9WU84 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CcsQ9WU84 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcsQ9WU84 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcsQ9WU84 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcsQ9WU84 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcsQ9WU84 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcsQ9WU84 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CcsQ9WU84 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcsQ9WU84 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CcsQ9WU84 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.76□□□□□ -0.53
CcsQ9WU84 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
CcsQ9WU84 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
CcsQ9WU84 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
CcsQ9WU84 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Gm13186-201ENSMUST00000118031 316 ntBASIC11.76□□□□□ -0.53
CcsQ9WU84 Gm29518-201ENSMUST00000190858 372 ntBASIC11.76□□□□□ -0.53
CcsQ9WU84 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
CcsQ9WU84 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC11.76□□□□□ -0.53
CcsQ9WU84 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
CcsQ9WU84 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
CcsQ9WU84 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.76□□□□□ -0.53
CcsQ9WU84 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.76□□□□□ -0.53
CcsQ9WU84 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcsQ9WU84 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms