Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Gm10253-201ENSMUST00000194270 940 ntBASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Gm5779-201ENSMUST00000218467 910 ntBASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col13a1Q9R1N9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Gm18489-201ENSMUST00000172565 551 ntBASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Thap2-203ENSMUST00000218989 527 ntBASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col13a1Q9R1N9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Gm9385-201ENSMUST00000117563 472 ntBASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col13a1Q9R1N9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms