Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Vps29Q9QZ88 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.48□□□□□ -0.09
Vps29Q9QZ88 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.48□□□□□ -0.09
Vps29Q9QZ88 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps29Q9QZ88 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps29Q9QZ88 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps29Q9QZ88 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps29Q9QZ88 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vps29Q9QZ88 Efs-202ENSMUST00000227037 2540 ntBASIC14.48□□□□□ -0.09
Vps29Q9QZ88 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps29Q9QZ88 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps29Q9QZ88 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps29Q9QZ88 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps29Q9QZ88 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vps29Q9QZ88 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps29Q9QZ88 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.48□□□□□ -0.09
Vps29Q9QZ88 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Gm7222-201ENSMUST00000117512 906 ntBASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.47□□□□□ -0.09
Vps29Q9QZ88 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.47□□□□□ -0.09
Vps29Q9QZ88 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps29Q9QZ88 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps29Q9QZ88 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps29Q9QZ88 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps29Q9QZ88 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps29Q9QZ88 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Vps29Q9QZ88 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps29Q9QZ88 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Vps29Q9QZ88 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps29Q9QZ88 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps29Q9QZ88 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps29Q9QZ88 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.46□□□□□ -0.09
Vps29Q9QZ88 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Vps29Q9QZ88 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Vps29Q9QZ88 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vps29Q9QZ88 Gm9682-201ENSMUST00000197505 556 ntBASIC14.46□□□□□ -0.09
Vps29Q9QZ88 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.46□□□□□ -0.09
Vps29Q9QZ88 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps29Q9QZ88 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vps29Q9QZ88 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps29Q9QZ88 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Vps29Q9QZ88 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
Vps29Q9QZ88 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps29Q9QZ88 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps29Q9QZ88 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.46□□□□□ -0.09
Vps29Q9QZ88 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps29Q9QZ88 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps29Q9QZ88 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Vps29Q9QZ88 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.46□□□□□ -0.1
Vps29Q9QZ88 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.46□□□□□ -0.1
Vps29Q9QZ88 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Vps29Q9QZ88 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps29Q9QZ88 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vps29Q9QZ88 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vps29Q9QZ88 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps29Q9QZ88 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Vps29Q9QZ88 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps29Q9QZ88 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps29Q9QZ88 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps29Q9QZ88 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Vps29Q9QZ88 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.45□□□□□ -0.1
Vps29Q9QZ88 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Vps29Q9QZ88 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps29Q9QZ88 Gm7230-201ENSMUST00000173026 815 ntBASIC14.45□□□□□ -0.1
Vps29Q9QZ88 Gm5682-201ENSMUST00000173402 505 ntBASIC14.45□□□□□ -0.1
Vps29Q9QZ88 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms