Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six6Q9QZ28 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Six6Q9QZ28 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six6Q9QZ28 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Six6Q9QZ28 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Six6Q9QZ28 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six6Q9QZ28 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Six6Q9QZ28 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six6Q9QZ28 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Six6Q9QZ28 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.84□□□□□ -0.35
Six6Q9QZ28 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.84□□□□□ -0.35
Six6Q9QZ28 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six6Q9QZ28 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Six6Q9QZ28 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.84□□□□□ -0.35
Six6Q9QZ28 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Six6Q9QZ28 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.35
Six6Q9QZ28 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Six6Q9QZ28 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Six6Q9QZ28 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Six6Q9QZ28 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Six6Q9QZ28 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Six6Q9QZ28 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Six6Q9QZ28 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Six6Q9QZ28 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Six6Q9QZ28 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six6Q9QZ28 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Six6Q9QZ28 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six6Q9QZ28 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six6Q9QZ28 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six6Q9QZ28 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms