Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a2Q9JLR1 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a2Q9JLR1 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Gm4535-201ENSMUST00000182274 558 ntBASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Gm10355-201ENSMUST00000097146 517 ntBASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a2Q9JLR1 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Gm14722-201ENSMUST00000118943 689 ntBASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Gm7862-201ENSMUST00000121461 292 ntBASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Sec61a2Q9JLR1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms